Browse-BactMentha

Display specific BactMentha datasets

BactMentha dataset filtered on host taxa:

Click on a taxon button to display the BactMentha database pathogen-host protein-protein interactions for the corresponding host taxon.
/!\ Loading the Human and All taxa tables can take a few seconds. Thanks for your comprehension.

All Data

Human

Mouse

Rat

BactMentha dataset filtered on pathogen categories:

The World Health Organization (WHO) Priority Pathogens are infectious microorganisms considered a significant threat to global public health, often due to their potential for causing severe outbreaks or limited treatment options. According to the European Union classification system of biological agents, hazard groups (from 1 to 4) categorize, based on their risk, those which may affect the human health (https://www.hse.gov.uk/pubns/misc208.pdf). Click on the following buttons to filter the BactMentha Datasets and display only the interactions involving pathogens in either WHO priority list or in an Hazard group. (Filter on Hazard groups 1 and 4 have not been added as no such pathogens are found in BactMentha).

Who priority
or
Hazard groups

Who priority

Hazard group 2

Hazard group 3

BactMentha dataset filtered on Human-Bacteria annotated protein interactions:

Experimental data have been recovered on some protein-protein interactions, which permit to get more details on the binding regions on either host protein side, pathogen protein side or both. The Ontology Search (OS) definition of those binding regions can be found here. Moreover, mimicINT tool have been used to infer some interaction interfaces between Human proteins and bacterial proteins based on known domain-domain or domain-motif templates of interaction. Click on the following buttons to display only the Human-Bacteria protein-protein interactions for which there are known experimental binding regions (BR) on at least one protein side or mimicINT predicted interfaces (MI) of interaction (always both sides).

Binding regions

mimicINT interfaces

Bacterial pathogens in hazard group 2

Taxon ID	Taxon Name	Taxon Family	WHO priority	Hazard Group
562	Escherichia coli	Enterobacteriaceae	critical	2
1491	Clostridium botulinum	Clostridiaceae	NULL	2
212042	Anaplasma phagocytophilum (strain HZ)	Anaplasmataceae	NULL	2
272624	Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)	Legionellaceae	NULL	2
574521	Escherichia coli O127:H6 (strain E2348/69 / EPEC)	Enterobacteriaceae	critical	2
210	Helicobacter pylori	Helicobacteraceae	NULL	2
238	Elizabethkingia meningoseptica	Weeksellaceae	NULL	2
446	Legionella pneumophila	Legionellaceae	NULL	2
630	Yersinia enterocolitica	Yersiniaceae	NULL	2
747	Pasteurella multocida	Pasteurellaceae	NULL	2
1502	Clostridium perfringens	Clostridiaceae	NULL	2
90371	Salmonella typhimurium	Enterobacteriaceae	high	2
99287	Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)	Enterobacteriaceae	high	2
169963	Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)	Listeriaceae	NULL	2
208964	Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)	Pseudomonadaceae	high	2
216597	Salmonella typhimurium (strain SL1344)	Enterobacteriaceae	high	2
243277	Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)	Vibrionaceae	NULL	2
272561	Chlamydia trachomatis serovar D (strain ATCC VR-885 / DSM 19411 / UW-3/Cx)	Chlamydiaceae	NULL	2
393305	Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)	Yersiniaceae	NULL	2
441771	Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A)	Clostridiaceae	NULL	2
588858	Salmonella typhimurium (strain 14028s / SGSC 2262)	Enterobacteriaceae	high	2
287	Pseudomonas aeruginosa	Pseudomonadaceae	high	2
480	Moraxella catarrhalis	Moraxellaceae	NULL	2
485	Neisseria gonorrhoeae	Neisseriaceae	high	2
487	Neisseria meningitidis	Neisseriaceae	NULL	2
491	Neisseria meningitidis serogroup B	Neisseriaceae	NULL	2
622	Shigella dysenteriae	Enterobacteriaceae	high	2
623	Shigella flexneri	Enterobacteriaceae	high	2
636	Edwardsiella tarda	Hafniaceae	NULL	2
672	Vibrio vulnificus	Vibrionaceae	NULL	2
727	Haemophilus influenzae	Pasteurellaceae	medium	2
1280	Staphylococcus aureus	Staphylococcaceae	high	2
1309	Streptococcus mutans	Streptococcaceae	NULL	2
1314	Streptococcus pyogenes	Streptococcaceae	medium	2
1320	Streptococcus sp. group G	Streptococcaceae	NULL	2
1334	Streptococcus dysgalactiae	Streptococcaceae	NULL	2
1496	Clostridioides difficile	Peptostreptococcaceae	NULL	2
85962	Helicobacter pylori (strain ATCC 700392 / 26695)	Helicobacteraceae	NULL	2
93061	Staphylococcus aureus (strain NCTC 8325 / PS 47)	Staphylococcaceae	high	2
102618	Helicobacter pylori NCTC 11637 = CCUG 17874 = ATCC 43504 = JCM 12093	Helicobacteraceae	NULL	2
122586	Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)	Neisseriaceae	NULL	2
148942	Streptococcus equi subsp. equi	Streptococcaceae	NULL	2
149539	Salmonella enteritidis	Enterobacteriaceae	high	2
158878	Staphylococcus aureus (strain Mu50 / ATCC 700699)	Staphylococcaceae	high	2
158879	Staphylococcus aureus (strain N315)	Staphylococcaceae	high	2
205920	Ehrlichia chaffeensis (strain ATCC CRL-10679 / Arkansas)	Anaplasmataceae	NULL	2
212717	Clostridium tetani (strain Massachusetts / E88)	Clostridiaceae	NULL	2
227941	Chlamydia caviae (strain ATCC VR-813 / DSM 19441 / 03DC25 / GPIC)	Chlamydiaceae	NULL	2
233412	Haemophilus ducreyi (strain 35000HP / ATCC 700724)	Pasteurellaceae	NULL	2
242619	Porphyromonas gingivalis (strain ATCC BAA-308 / W83)	Porphyromonadaceae	NULL	2
243243	Mycobacterium avium (strain 104)	Mycobacteriaceae	NULL	2
257310	Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)	Alcaligenaceae	NULL	2
257313	Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)	Alcaligenaceae	NULL	2
272634	Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)	Mycoplasmoidaceae	NULL	2
272843	Pasteurella multocida (strain Pm70)	Pasteurellaceae	NULL	2
273123	Yersinia pseudotuberculosis serotype I (strain IP32953)	Yersiniaceae	NULL	2
297245	Legionella pneumophila (strain Lens)	Legionellaceae	NULL	2
297246	Legionella pneumophila (strain Paris)	Legionellaceae	NULL	2
301447	Streptococcus pyogenes serotype M1	Streptococcaceae	medium	2
301452	Streptococcus pyogenes serotype M49	Streptococcaceae	medium	2
315277	Chlamydia trachomatis serovar A (strain ATCC VR-571B / DSM 19440 / HAR-13)	Chlamydiaceae	NULL	2
319701	Streptococcus pyogenes serotype M28 (strain MGAS6180)	Streptococcaceae	medium	2
375177	Haemophilus influenzae (strain NTHi 3655)	Pasteurellaceae	medium	2
441772	Clostridium botulinum (strain Langeland / NCTC 10281 / Type F)	Clostridiaceae	NULL	2
471472	Chlamydia trachomatis serovar L2 (strain ATCC VR-902B / DSM 19102 / 434/Bu)	Chlamydiaceae	NULL	2
498213	Clostridium botulinum (strain Okra / Type B1)	Clostridiaceae	NULL	2
563041	Helicobacter pylori (strain G27)	Helicobacteraceae	NULL	2
596329	Peptostreptococcus anaerobius 653-L	Peptostreptococcaceae	NULL	2
701177	Escherichia coli O55:H7 (strain CB9615 / EPEC)	Enterobacteriaceae	critical	2
862964	Haemophilus influenzae (strain 10810)	Pasteurellaceae	medium	2
1236608	Moraxella catarrhalis (strain BBH18)	Moraxellaceae	NULL	2
1334565	Listeria monocytogenes serotype 1/2a (strain EGD / Mackaness)	Listeriaceae	NULL	2

▲