Browse-BactMentha

Display specific BactMentha datasets

BactMentha dataset filtered on host taxa:

Click on a taxon button to display the BactMentha database pathogen-host protein-protein interactions for the corresponding host taxon.
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All Data

Human

Mouse

Rat

BactMentha dataset filtered on pathogen categories:

The World Health Organization (WHO) Priority Pathogens are infectious microorganisms considered a significant threat to global public health, often due to their potential for causing severe outbreaks or limited treatment options. According to the European Union classification system of biological agents, hazard groups (from 1 to 4) categorize, based on their risk, those which may affect the human health (https://www.hse.gov.uk/pubns/misc208.pdf). Click on the following buttons to filter the BactMentha Dataset and display only the interactions involving pathogens in either WHO priority list or in an Hazard group. (Filter on Hazard groups 1 and 4 have not been added as no such pathogens are found in BactMentha).

Who priority
or
Hazard groups

Who priority

Hazard group 2

Hazard group 3

BactMentha dataset filtered on annotated protein interactions:

Available data on experimentally detected binding regions have been gathered from IMEx databases, thus providing the details on the sequence regions of either bacteria or host proteins (or both) involved in the interactions. The Ontology Search (OS) definition describing these binding regions can be found here. Moreover, the mimicINT workflow have been used to predict the interaction interfaces between Human proteins and bacterial proteins based on known domain-domain or domain-motif interaction templates. Click on the following buttons to display only the Human-Bacteria protein-protein interactions for which there are known experimental binding regions (BR) on at least one interacting protein or mimicINT predicted interaction interfaces (MI) of interaction (predicted regions are for both proteins).

Binding regions

mimicINT interfaces

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